Publishing a research repository
Formatting, containerising, publishing, archiving code
experience
reproducibility
R
renv
webdev
For the weekly team meeting of the Biodiversity Synthesis group, I prepared a, Quarto, presentation about Publishing a Research Repository. In this presentation and during the 1-hour hands-on workshop that happened with the team, I advocated for:
- Formatting the code for better readability
- Listing package versions with
renvfor reproducibility - Writing a README and a CITATION.cff for clarity
- Publishing on GitHub for visibility
- Archiving on Zenodo for posterity
And I tried to make each step as easy to follow as possible by linking to other resources and by showing. In the course of the workshop, my presentation became a git project, was documented before being pushed to GitHub and finally making it to Zenodo thanks to Zenodo great Release watching feature. And it received a DOI!
Here is the presentation, enjoy, share, comment!